Aflaki F, Gutzat R, Mozgová I (2022) Chromatin during plant regeneration: Opening towards root identity? Curr Opin Plant Biol 69:102265.
Berger F (2022) Histone variants: The architects of chromatin. Semin Cell Dev Biol 135:1-2.
Berger F (2022) One residue-one function. Science 375(6586):1232-3.
Berger F (2022) Which field of research would Gregor Mendel choose in the 21st century? Plant Cell 34(7):2462-5.
Berger F, Muegge K, Richards EJ (2022) Seminars in cell and development biology on histone variants remodelers of H2A variants associated with heterochromatin. Semin Cell Dev Biol 135:93-101.
Bindics J, Khan M, Uhse S, et al. (2022) Many ways to TOPLESS - manipulation of plant auxin signalling by a cluster of fungal effectors. New Phytol 236(4):1455-70.
Bourguet P, Yelagandula R, Kim To T, et al. (2022) The histone variant H2A.W cooperates with chromatin modifications and linker histone H1 to maintain transcriptional silencing of transposons in Arabidopsis. bioRxiv:2022.05.31.493688.
Bowman JL, Arteaga-Vazquez M, Berger F, et al. (2022) The Renaissance and Enlightenment of Marchantia as a model system. Plant Cell 34(10):3512-42.
Brachi B, Filiault D, Whitehurst H, et al. (2022) Plant genetic effects on microbial hubs impact host fitness in repeated field trials. Proc Natl Acad Sci USA 119(30):e2201285119 preprint bioRxiv:181198.
Brelsford CC, Trasser M, Paris T, et al. (2022) Understorey light quality affects leaf pigments and leaf phenology in different plant functional types. Physiol Plant 174(3):13723.
Cairo A, Vargova A, Shukla N, et al. (2022) Meiotic exit in Arabidopsis is driven by P-body-mediated inhibition of translation. Science 377(6606).
Casey A and Dolan L (2022) Genes encoding cytochrome P450 monooxygenases and glutathione S-transferases associated with herbicide resistance evolved before the origin of land plants. bioRxiv:2022.08.12.503801.
Chaube MA, Trattnig N, Lee DH, et al. (2022) Synthesis of Fungal Cell Wall Oligosaccharides and Their Ability to Trigger Plant Immune Responses. Euopean J Org Chem 2022(27):e202200313.
Clauw P, Kerdaffrec E, Gunis J, et al. (2022) Locally adaptive temperature response of vegetative growth in Arabidopsis thaliana. Elife 11:e77913 preprint bioRxiv:2022.02.15.480488.
Dahan-Meir T, Ellis TJ, Mafessoni F, et al. (2022) The genetic structure of a wild wheat population has remained associated with microhabitats over 36 years. bioRxiv:2022.01.10.475641.
De la Concepcion, Fujisaki K, Bentham AR, et al. (2022) Binding of a blast fungus Zinc-finger fold effector to a hydrophobic pocket in the host exocyst subunit Exo70 modulates immune recognition in rice. bioRxiv:2022.06.18.496527.
Deja-Muylle A, Opdenacker D, Parizot B, et al. (2022) Genetic Variability of Arabidopsis thaliana Mature Root System Architecture and Genome-Wide Association Study. Front Plant Sci 12:814110.
Durán P, Ellis TJ, Thiergart T, et al. (2022) Climate drives rhizosphere microbiome variation and divergent selection between geographically distant Arabidopsis populations. New Phytol 236(2):608-21.
Feng Q, De Rycke R, Dagdas Y, et al. (2022) Autophagy promotes programmed cell death and corpse clearance in specific cell types of the Arabidopsis root cap. Curr Biol 32(9):2110-9 preprint bioRxiv:2022.02.16.480680.
Galanti D, Ramous-Cruz D, Nunn A, et al. (2022) Genetic and environmental drivers of large-scale epigenetic variation in Thlaspi arvense. PLoS Genet 18(10):e1010452 preprint bioRxiv:2022.03.16.484610.
Gobinath R, Parasuraman S, Sreeramanan S, et al. (2022) Antidiabetic and Antihyperlipidemic Effects of Methanolic Extract of Leaves of Spondias mombin in Streptozotocin-Induced Diabetic Rats. Front Physiol 13:870399.
Gonzalez Somermeyer L, Fleiss A, Mishin AS, et al. (2022) Heterogeneity of the GFP fitness landscape and data-driven protein design. Elife 11:e75842.
Heilman KA, Dietze MC, Arizpe AA, et al. (2022) Ecological forecasting of tree growth: Regional fusion of tree-ring and forest inventory data to quantify drivers and characterize uncertainty. Glob Chang Biol 28(7):2442-60.
Heilman KA, Dietze MC, Arizpe AA, et al. (2022) Ecological forecasting of tree growth: Regional fusion of tree-ring and forest inventory data to quantify drivers and characterize uncertainty. Glob Chang Biol [epub].
Hüther P, Hagmann J, ..., Becker C (2022) MethylScore, a pipeline for accurate and context-aware identification of differentially methylated regions from population-scale plant whole-genome bisulfite sequencing data. Quant Plant Biol 3:e19.
Hüther P, Hagmann J, Nunn A, et al. (2022) MethylScore, a pipeline for accurate and context-aware identification of differentially methylated regions from population-scale plant WGBS data. bioRxiv:2022.01.06.475031.
Jamge B and Berger F (2022) Diversification of chromatin organization in eukaryotes. Curr Opin Cell Biol 74:1-6.
Jamge B, Lorković Z, Axelsson E, at al. (2022) Transcriptional activity is shaped by the chromatin landscapes in Arabidopsis. bioRxiv:2022.06.02.494419.
Jin M, Liu H, Liu X, et al. (2022) Complex genetic architecture underlying the plasticity of maize agronomic traits. bioRxiv: 2022.01.18.476828.
Kakui H, Tsuchimatsu T, Yamazaki M, et al. (2022) Pollen Number and Ribosome Gene Expression Altered in a Genome-Editing Mutant of REDUCED POLLEN NUMBER1 Gene. Front Plant Sci 12:768584.
Knoch E, Kovács J, Deiber S, et al. (2022) Transcriptional response of a target plant to benzoxazinoid and diterpene allelochemicals highlights commonalities in detoxification. BMC Plant Biol 22(1):402 preprint bioRxiv:2022.02.21.480921.
Korolyova N, Buechling A, Ďuračiová R, et al. (2022) The Last Trees Standing: Climate modulates tree survival factors during a prolonged bark beetle outbreak in Europe. Agricultural and Forest Meteorology 322(15):109025.
Korvigo I, Igolkina AA, Kichko AA, et al. (2022) Be aware of the allele-specific bias and compositional effects in multi-template PCR. PeerJ 10:e13888.
Lee D, Choi I, Park SJ, et al. (2022) Three consecutive glycolysis enzymes are involved in autophagic flux regulation through monitoring nutrient availability. bioRxiv:2022.07.12.499818.
Maidment JHR, Shimizu M, Vera S, et al. (2022) Effector target-guided engineering of an integrated domain expands the disease resistance profile of a rice NLR immune receptor. bioRxiv:2022.06.14.496076.
Mayer RL, Matzinger M, Schmücker A, et al. (2022) Wide Window Acquisition and AI-based data analysis to reach deep proteome coverage for a wide sample range, including single cell proteomic inputs. bioRxiv:2022.09.01.506203.
McWhite CD, Sae-Lee W, Yuan Y, et al. (2022) Alternative proteoforms and proteoform-dependent assemblies in humans and plants. bioRxiv:2022.09.21.508930.
Michl-Holzinger P, Obermeyer S, Markusch H, et al. (2022) Phosphorylation of the FACT histone chaperone subunit SPT16 affects chromatin at RNA polymerase II transcriptional start sites in Arabidopsis. Nucleic Acids Res [epub].
Mittelsten Scheid O (2022) Mendelian and non-Mendelian genetics in model plants. Plant Cell 34(7):2455-61.
Montgomery SA, Hisanaga T, Wang N, et al. (2022) Polycomb-mediated repression of paternal chromosomes maintains haploid dosage in diploid embryos of Marchantia. Elife 11:e79258 preprint bioRxiv:2022.02.04.477531.
Morales L and Swarts K (2022) Heritable and climatic sources of variation in juvenile tree growth in an Austrian common garden experiment of Central European Norway spruce populations. Forests 13(5):809 preprint bioRxiv:2022.01.10.475611.
Naumann C, Heisters M, Brandt W, et al. (2022) Bacterial-type ferroxidase tunes iron-dependent phosphate sensing during Arabidopsis root development. Curr Biol 32(101): 2189-205 preprint bioRxiv:2021.03.19.436157.
Nguyen V and Gutzat R (2022) Epigenetic regulation in the shoot apical meristem. Curr Opin Plant Biol 69:102267.
Nunn A, Rodríguez-Arévalo I, Tandukar Z, et al. (2022) Chromosome-level Thlaspi arvense genome provides new tools for translational research and for a newly domesticated cash cover crop of the cooler climates. Plant Biotechnol J 20(5):944-63.
Picchianti L, Sedivy A, Dagdas Y (2022) Characterization of ATG8-Family Interactors by Isothermal Titration Calorimetry. Methods Mol Biol 2581:149-76.
Platre MP, Satbhai S, Brent L, et al. (2022) The receptor kinase SRF3 coordinates iron-level and flagellin dependent defense and growth responses in plants. Nat Commun 13(1):4445 preprint bioRxiv:2021.04.26.441470.
Provorov NA, Andronov EE, Kimeklis AK, et al. (2022) Microevolution, speciation and macroevolution in rhizobia: Genomic mechanisms and selective patterns. Front Plant Sci 13:1026943.
Rodríguez BD, Galanti D, Nunn A, et al. (2022) Epigenetic variation in the Lombardy poplar along climatic gradients is independent of genetic structure and persists across clonal reproduction. bioRxiv:2022.11.17.516862.
Saado I, Chia KS, ..., Djamei A (2022) Effector-mediated relocalization of a maize lipoxygenase protein triggers susceptibility to Ustilago maydis. Plant Cell 34(7):2785-805.
Sasaki E, Gunis J, Reichardt-Gomez I, et al. (2022) Conditional GWAS of non-CG transposon methylation in Arabidopsis thaliana reveals major polymorphisms in five genes. PLoS Gene 18(9):e1010345 preprint bioRxiv:2022.02.09.479810.
Schmitz RJ and Mittelsten Scheid O (2022) Editorial overview: COPB issue 2022 on "epigenetics and gene regulation". Curr Opin Plant Biol 70:102305.
Stegmann M, Zecua-Ramirez P, Ludwig C, et al. (2022) RGI-GOLVEN signaling promotes cell surface immune receptor abundance to regulate plant immunity. EMBO Rep 23(5):e53281 preprint bioRxiv:2021.01.29.428839..
Stejskal K, Jeff OB, Matzinger M, et al. (2022) Deep Proteome Profiling with Reduced Carryover Using Superficially Porous Microfabricated nanoLC Columns. Anal Chem 94(46):15930-8.
Vallebueno-Estrada M, Hernandez-Robles GG, Gonzalez-Orozco E, et al. (2022) Domestication and lowland adaptation of coastal preceramic maize from Paredones, Peru. bioRxiv:2022.02.23.481166.
Vallebueno-Estrada M, Steindl S, ..., Swarts K (2022) Multi-GBS: A massively multiplexed GBS-based protocol optimized for large, repetitive conifer genomes. bioRxiv:2022.01.10.475685.
Vedanayagam J, Lin C, Papareddy R, et al. (2022) Endogenous RNAi silences a burgeoning sex chromosome arms race. bioRxiv:2022.08.22.504821.
Wang S, Gao S, Nie J, et al. (2022) Improved 93-11 Genome and Time-Course Transcriptome Expand Resources for Rice Genomics. Front Plant Sci 12:769700.
Xu J, Wang Q, Wang S, et al. (2022) Comparative genomics of Sarcoptes scabiei provide new insights into adaptation to permanent parasitism and within-host species divergence. Transbound Emerg Dis 69(6):3468-84.
Zess EK, Dagdas Y, Peers E, et al. (2022) Regressive evolution of an effector following a host jump in the Irish Potato Famine Pathogen Lineage. PLoS Pathogen 18(10):e10918 preprint bioRxiv:2021.10.04.463104.
Zhao J, Bui MT, ..., Dagdas Y (2022) Plant autophagosomes mature into amphisomes prior to their delivery to the central vacuole. J Cell Biol 221(12):e202203139 preprint bioRxiv:2022.02.26.482093.
Zhao T, Lu J, Zhang H, et al. (2022) Histone H3.3 deposition in seed is essential for the post-embryonic developmental competence in Arabidopsis. Nat Commun 13(1):7728.
Zheng R, Stejskal K, Pynn C, et al. (2022) Deep Single-Shot NanoLC-MS Proteome Profiling with a 1500 Bar UHPLC System, Long Fully Porous Columns, and HRAM MS. J Proteome Res 21(10):2545-21.
Zuo Z, Roux ME, Dagdas Y, et al.(2022) PAT mRNA decapping factors function specifically and redundantly during development in Arabidopsis. bioRxiv:2022.07.06.498930.
Latzel V, Fischer M, Groot M, et al. (2022) Parental environmental effects are common and strong, but unpredictable, in Arabidopsis thaliana. New Phytol [epub] preprin bioRxiv:2021.11.04.467350.