Rainer Kurmayer


Present position:



Research area:

Phone:
Fax:
e-mail:


Senior Scientist
Head of working group

Molecular ecology and physiology of cyanobacteria

+43 6232 3125-32
+43 6232 3578
rainer.kurmayer@oeaw.ac.at

Employment History Research Staff Projects Teaching Publications

2007 – present: Senior scientist at the Institute for Limnology in Mondsee, Lecturer at the University of Vienna, Faculty of Life Sciences (University Docent)

2001 – 2007: Junior scientist at the Institute for Limnology in Mondsee

1999 – 2001 Post doc position at the Federal Environmental Agency and Humboldt University, Berlin, Germany

1997 – 1999 PhD fellow at the University of Vienna, granted by the Austrian Academy of Sciences
Workshop

Announcement mutagenisation workshop July 2011, Mondsee/AUSTRIA

We are happy to announce a mutagenisation workshop on the toxigenic cyanobacterium Planktothrix, which is one of the more abundant harmful algal species in freshwater. Since more and more genome information on this particular genus gets available we plan to offer a training on our favorite genetic mutagenisation technique that would allow to inactivate particular genes involved in toxic (bioactive) peptide production.

Two alternative courses will be organized from the 11-15th July and 21-22nd July 2011. The 5-days course is thought for participants with little experience in molecular biology. The 2-days course will deal exclusively with the Planktothrix mutagenesis protocol and is meant for experienced molecular biologists who are skilled in DNA construct preparation.

We installed a workshop e-mail address: planktothrix@gmail.com. This e-mail address will be used for any further correspondence. Please find detailed information in the enclosed announcement (announcement). The deadline for application will be the 15th April 2011 (application form). A second circular will be sent at the end of April as soon as the number of participants is fixed.

"The workshop has been performed with 12 participants from 11 countries. The summary report has been sent to the applicants (PDF dazu). We thank all our participants for the interest into this topic and look forward to a continuing cooperation." PDF-woshop-report

Research

Cyanobacteria occur frequently in freshwater and show an impressive diversity in the production of small bioactive peptides, i.e. the microcystins and related molecules. Many of these compounds are produced by thiotemplate mechanism underlying the non-ribosomal peptide synthesis pathway. It is the aim to understand the processes influencing the evolution of these complex synthesis pathways and to elucidate the mechanisms that contribute to the molecular diversity that is observed in our lakes. By linking molecular insights with ecological research, the time scales and mechanisms relevant to changes in the synthesis of secondary metabolites can be studied both on a molecular level and on the level of populations. The understanding of the (micro) evolution of the genes involved in the synthesis of bioactive metabolites is also relevant to solve problems with water resources deteriorated by toxic cyanobacteria.

Staff

Lieselotte Eisl (Technical assistant)

Anneliese Wiedlroither (Technical assistant)

Johann Knoll (Technical assistant)

Veronika Ostermaier (PhD student, DOC-FORTE fellowship)

Nadja Straubinger (PhD student, EU project BOMOSA, http://bomosa.oeaw.ac.at )

Philipp Trummer (PhD student, Project RADICAL)

Stephan Blank (PhD student)

Projects

Risk Analysis of Direct and Indirect Climate effects on deep Austrian Lake Ecosystems (RADICAL) Climate and Energy Fund of the Federal State, ACRP (2009-2012)

“Genotype determined toxin content in cyanobacteria”, funded by the Austrian Science Fund, P20231, www.fwf.at , July 2008 – June 2011

“Natural products from cyanobacteria”, funded by Cyano Biotech GmbH, Chausseestr. 117, D-10115 Berlin, www.cyano-biotech.com

“DEcadal deTECTion of biodIVErsity in alpine lakes, DETECTIVE - Global warming threatens biodiversity in (ultra)-sensitive Alpine lakes: an assessment of past, present and future scenarios" funded by the Alpine Research Programme of the Austrian Academy of Sciences (Dec 2009 - Dec 2012), National and International Research Programme.

Finished projects

“Linking Cyanotoxin production to genetic diversity” funded by the Austrian Science Fund P15709, www.fwf.ac.at , finished

"Microevolution of toxin synthesis in cyanobacteria" funded by the Austrian Science Fund P18185, www.fwf.ac.at , finished

“Use of cyanobacteria for the production of ethanol”, funded by Cyano BioFuels, Magnusstrasse 11, D-12489 Berlin, www.cyano-biofuels.com/, finished

“Toxic and other bioactive PEPtides in Cyanobacteria” (PEPCY), funded by the European Community, QLK4-CT-2002-02634, finished, www.pepcy.de , Link to Final report. PDF (FINAL report PEPCY)

As a deliverable for the PEPCY project “A manual on the use of genetic techniques to quantify genotypes of cyanobacteria in freshwater” has been compiled. Link to manual. PDF

Teaching

Lectures and practica

300552 VO Physiology and Ecology of Cyanobacteria
(in German), Winter Semester, University of Vienna, UZAI, Althanstrasse 14, Konferenzraum Ökologie

Skriptum: Ökologie und Physiologie von Cyanobakterien (Teile 1-7), (PDF dazu).

Vorbesprechung, Skriptum: “Cyanobakterien-Wen kümmerts” PDF

Summary

Cyanobacteria occur all over the world and colonize freshwater and marine systems, hot springs, and terrestrial habitats. They dominate in benthic communities in the littoral zone of aquatic systems as well as in the pelagic zone of freshwater systems and the oceans. Cyanobacteria fascinate by their physiological adaptations and their metabolic diversity, for example through the production of toxic and bioactive compounds. This lecture will introduce into the physiological properties of cyanobacteria and their ecology in aquatic and terrestrial ecosystems. The ecological role of the production of bioactive compounds and the consequences for humans will be discussed.

Diploma theses

1. Quantification of toxin genes in surface waters by real-time PCR (Thomas Kutzenberger, Univ. of Vienna)
2. Assessment of toxin producing cyanobacteria in Mwanza Gulf - Lake Victoria (Baraka Sekadende, IHE Delft, The Netherlands)
3. Phenotypic and genotypic characterisation of isolates of the toxic cyanobacterium Planktothrix (Marlies Gumpenberger, Univ. of Salzburg)
4. Characterising the content of two cyclic peptides and phytoplankton pigments in isolates of the toxic cyanobacterium Planktothrix spp. under maximum growth rate conditions (Simone Kosol, Univ. of Salzburg)
5. Toxic cyanobacteria in Ugandan freshwater habitats (William Okello, IHE Delft, The Netherlands)
6. Abundance of specific microcystin-deficient genotypes in Planktothrix rubescens populations of the Salzkammergut Area, Upper Austria (Qian Liu, IHE Delft, The Netherlands)
7. Phylogenetic characterisation of mutations inactivating the biosynthesis of the toxic heptapeptide microcystin (Carole Molitor, Univ. of Innsbruck)
8. Seasonal abundance of mutation and recombination in microcystin genes in populations of cyanobacteria (Veronika Ostermaier, Univ. of Munich)
9. Analysis of phytoplankton composition during stratification of Lake Victoria (Mwanza Gulf, Tanzania), Athanasio Mbonde (IHE Delft, The Netherlands)
10. The concentration of microcystins in Rastineobola argentea in Nyanza Gulf, Lake Victoria, Kenya (Benard Simiyu, IHE Delft, the Netherlands)

PhD theses


1.Diversity in abundance of toxic genotypes in populations of the cyanobacterium Planktothrix spp. (Eva Schober, Univ. of Vienna)
2. Molecular and chemical characterisation of toxic cyanobacteria in Ugandan freshwater (William Okello, Univ. of Vienna)
3. Effects of cage fish farming systems on phytoplankton and water quality in small ponds of East Africa (Nadja Straubinger, Univ. of Vienna), EU project BOMOSA, http://bomosa.oeaw.ac.at
4. Time in microevolution of microcystin synthesis (Veronika Ostermaier, Univ. of Vienna), DOC-FORTE fellowship 2009-2011
5. Cyanobacteria population development and regulation of toxin production in a mesotrophic deep lake in the Alps (Philipp Trummer, Univ. of Vienna), project RADICAL
6. Assessment of planktonic diversity in alpine lakes by means of ultra-deep sequencing (Stephan Blank, Univ. of Vienna), project DETECTIVE (Link dazu)
7. Molecular Ecology and Physiology of Cyanobacteria in the Ecosystems of Freshwater and Sediments (Qin Chen, Northwest A&F University, Yangling, Shaanxi Province)

Publications

In press


2011

Savichtcheva, O., Debroas, D., Kurmayer, R., Villar, C., Jenny J.P., Fabien A., Perga M.E., Domaizon I. (2011) Quantitative PCR enumeration of total and toxic Planktothrix rubescens/agardhii and other cyanobacteria in preserved DNA isolated from lake sediments. Applied and Environmental Microbiology 77:8744-8753. doi: 10.1128/​AEM.06106-11 PDF

Christiansen, G., Philmus, B., Hemscheidt, T., and Kurmayer, R. (2011) Genetic variation of adenylation domains of the anabaenopeptin synthesis operon and the evolution of substrate promiscuity. Journal of Bacteriology 193, 3822-3831 PDF

Okello, W., Kurmayer, R. (2011) Seasonal development of cyanobacteria and microcystin production in Ugandan freshwater lakes. Lakes & Reservoirs: Research & Management 16:123-135.

Babanazarova, O. V., Kurmayer R., Sidelev S. I., Aleksandrina E. M., and Sakharova E .G. (2011) Phytoplankton structure and microcystine concentration in the highly eutrophic Nero Lake . Water Resources; 39(2):229-236. PDF

Kurmayer, R.,
Schober E., Tonk L., Visser P., and Christiansen G. (2011) Spatial divergence in the proportions of genes encoding toxic peptide synthesis among populations of the cyanobacterium Planktothrix in European lakes. FEMS Microbiol Letters 317:127-137. PDF


Kurmayer, R.
(2011) The toxic cyanobacterium Nostoc strain 152 produces highest amounts of microcystin and nostophycin under stress conditions. Journal of Phycology 47:200-207. PDF


2010


Ostermaier, V., and Kurmayer, R. (2010) Application of real-time PCR to estimate toxin production by the cyanobacterium Planktothrix sp. Applied and Environmental Microbiology 76:3495-3502. PDF

Okello, W; Ostermaier, V; Portmann, C; Gademann, K, and Kurmayer, R. (2010) Spatial isolation favours the divergence in microcystin net production by Microcystis in Ugandan freshwater lakes. Water Research, (44: 2803-2814). PDF

Okello, W., Portmann, C., Erhard, M., Gademann, K., Kurmayer, R. (2010) Occurrence of microcystin-producing cyanobacteria in Ugandan freshwater habitats. Environ. Tox. 25: 367-380. PDF

2009

Kosol, S., Schmidt, J., and Kurmayer, R. (2009): Variation in peptide net production and growth among strains of the toxic cyanobacterium Planktothrix spp. Eur. J. Phycol. 44:49-62.
PDF

Kurmayer, R.
and Christiansen, G. (2009): The genetic basis of toxin production in Cyanobacteria. Freshwater Reviews 2:31-50 PDF

Ostermaier, V.
and Kurmayer, R. (2009): Distribution and abundance of nontoxic mutants of cyanobacteria in lakes of the Alps. Microbial Ecology _58:323-333.. PDF

2008

Christiansen, G., Yoshida W.Y., Blom, J., Portmann, C., Gademann, KG., Hemscheidt, T., and Kurmayer, R. (2008): Isolation and structure determination of two microcystins and sequence comparisons of McyABC adenylation domains in Planktothrix species. Journal of Natural Products 71:1881-1886. PDF Supplement

Christiansen G., Molitor C., Philmus B., and Kurmayer R. (2008): Non-toxic strains of cyanobacteria are the result of major gene deletion events induced by a transposable element. Molecular Biology and Evolution 25:1695-1704 Link

2007

Naselli-Flores, L., Barone, R., Chorus, I., and Kurmayer, R. (2007): Toxic cyanobacterial blooms under a semiarid mediterranean climate: The magnification of a problem. Environmental Toxicology 22:399-404. PDF

Ishida K., Christiansen G., Yoshida WY., Kurmayer R., Welker , Bonjoch J., Hertweck C., Börner T., Hemscheidt T., and Dittmann E. (2007): Biosynthetic pathway and structure analysis of aeruginoside 126A and B, cyanobacterial peptide glycosides bearing an unusual 2-carboxy-6-hydroxyoctahydroindole moiety. Chemistry and Biology 14: 565-576. Links to PDF's (Ishida et al. 2007), (preface Ishida et al. 2007)

Schober E., Werndl M., Laakso K., Korschineck I., Sivonen K., and Kurmayer R. (2007): Interlaboratory comparison of Taq Nuclease Assays for the quantification of the toxic cyanobacteria Microcystis sp. Journal of Microbiological Methods 69: 122-128. PDF

2006

Kurmayer R. and Gumpenberger M. (2006): Diversity of microcystin genotypes among populations of the filamentous cyanobacteria Planktothrix rubescens and Planktothrix agardhii. Molecular Ecology 15: 3849-3861. PDF

Schober E. and Kurmayer R. (2006): Evaluation of different DNA sampling techniques for the application of the real-time PCR method for the quantification of cyanobacteria in water. Letters in Applied Microbiology 42: 412-417. PDF

Christiansen G., Kurmayer R., Liu Q., and Börner T. (2006): Transposons inactivate the biosynthesis of the nonribosomal peptide microcystin in naturally occurring Planktothrix spp. Applied and Environmental Microbiology 72: 117-123. PDF, Cover

2005

Sekadende BC., Lyimo T. J., and Kurmayer R. (2005): Microcystin production by cyanobacteria in the Mwanza Gulf (Lake Victoria, Tanzania). Hydrobiologia 543: 299-304. PDF

Kurmayer R., Christiansen G., Gumpenberger M., and Fastner J. (2005): Genetic identification of microcystin ecotypes in toxic cyanobacteria of the genus Planktothrix . Microbiology 151: 1525-1533. PDF

2004

Via-Ordorika L., Fastner J., Kurmayer R., Hisbergues M., Dittmann E., Komarek J., Erhard M., and Chorus I. (2004): Distribution of microcystin-producing and non-microcystin-producing Microcystis sp. in European freshwater bodies: detection of microcystins and microcystin genes in individual colonies. Systematic and Applied Microbiology 27: 592-603. PDF

Kurmayer R., Christiansen G., Fastner J., and Börner T. (2004): Abundance of active and inactive microcystin genotypes in populations of the toxic cyanobacterium Planktothrix spp. Environmental Microbiology 6: 831-841. PDF, Cover

2003

Kurmayer R. and Kutzenberger T. (2003): Application of real-time PCR for the quantification of microcystin genotypes in a population of the toxic cyanobacterium Microcystis sp. Applied and Environmental Microbiology 69:6723-6730. PDF

Kurmayer R., Christiansen G., and Chorus I. (2003): The abundance of microcystin-producing genotypes correlates positively with colony size in Microcystis and determines its microcystin net production in Lake Wannsee. Applied and Environmental Microbiology 69/2: 787-795. PDF

2002

Kurmayer R., Dittmann E., Fastner J.and Chorus I. (2002): Diversity of microcystin genes within a population of the toxic cyanobacterium Microcystis spp. in Lake Wannsee (Berlin, Germany). Microbial Ecology 43: 107-118. PDF

2001

Kurmayer R. (2001): Competitive ability of Daphnia under dominance of non-toxic filamentous cyanobacteria, M. Boersma & K. Wiltshire (eds.): Proceedings of the V symposium on cladocera in Plön (Germany), Hydrobiologia 442: 279-289. PDF

2000

Kurmayer R. (2000): Nutritive vs. interfering effects of Anabaena sp. on Daphnia and Ceriodaphnia. Verh. Int. Ver. Limnol. 27: 3001-3005.

1999

Kurmayer R., and Jüttner F. (1999): Strategies for the coexistence of zooplankton with the toxic cyanobacterium Planktothrix rubescens in Lake Zürich. J. Plankt. Res., 21, 659-683. PDF

Popular scientific contributions

Kurmayer, R. (2006): Bedingungen und Steuerung der Toxinproduktion bei Cyanobakterien – aktueller Stand der Forschung. In: Toxinbildende Cyanobakterien (Blaualgen) in bayrischen Gewässern. Materalienband Nr. 125, Bayrisches Landesamt für Umwelt, pp. 116-143. Link to PDF (Bayr. Landesamt Bericht)

Kurmayer R. (2005): Dreckige Gewinner. Team vom Mondsee erforscht die Karriere von Blaualgen. Universum April 2005, No4: 91. PDF

ORF Science Channel, Young Science, http://science.orf.at/science/news/45445 - http://science.orf.at/science/news/96757

Editorial Board

Fundamental and Applied Limnology (http://www.schweizerbart.de/j/archiv-hydrobiologie)

Start of page